CDS

Accession Number TCMCG057C53436
gbkey CDS
Protein Id XP_018459270.1
Location join(12712..12739,12846..13247,13330..13484,13561..13635,13716..13985,14074..14424,14511..14873)
Gene LOC108830168
GeneID 108830168
Organism Raphanus sativus

Protein

Length 547aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018603768.1
Definition PREDICTED: rop guanine nucleotide exchange factor 14-like isoform X2 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category P
Description ribosome biogenesis
KEGG_TC 2.A.22.2
KEGG_Module -
KEGG_Reaction R02240        [VIEW IN KEGG]
KEGG_rclass RC00002        [VIEW IN KEGG]
RC00017        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
ko03021        [VIEW IN KEGG]
ko03036        [VIEW IN KEGG]
KEGG_ko ko:K00901        [VIEW IN KEGG]
ko:K05038        [VIEW IN KEGG]
ko:K11768        [VIEW IN KEGG]
ko:K14797        [VIEW IN KEGG]
EC 2.7.1.107        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00561        [VIEW IN KEGG]
ko00564        [VIEW IN KEGG]
ko01100        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko04070        [VIEW IN KEGG]
ko04072        [VIEW IN KEGG]
ko05231        [VIEW IN KEGG]
map00561        [VIEW IN KEGG]
map00564        [VIEW IN KEGG]
map01100        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map04070        [VIEW IN KEGG]
map04072        [VIEW IN KEGG]
map05231        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000447        [VIEW IN EMBL-EBI]
GO:0000460        [VIEW IN EMBL-EBI]
GO:0000462        [VIEW IN EMBL-EBI]
GO:0000466        [VIEW IN EMBL-EBI]
GO:0000469        [VIEW IN EMBL-EBI]
GO:0000478        [VIEW IN EMBL-EBI]
GO:0000479        [VIEW IN EMBL-EBI]
GO:0001701        [VIEW IN EMBL-EBI]
GO:0001824        [VIEW IN EMBL-EBI]
GO:0001825        [VIEW IN EMBL-EBI]
GO:0001829        [VIEW IN EMBL-EBI]
GO:0002237        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005856        [VIEW IN EMBL-EBI]
GO:0005874        [VIEW IN EMBL-EBI]
GO:0005881        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006403        [VIEW IN EMBL-EBI]
GO:0006405        [VIEW IN EMBL-EBI]
GO:0006406        [VIEW IN EMBL-EBI]
GO:0006611        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006886        [VIEW IN EMBL-EBI]
GO:0006913        [VIEW IN EMBL-EBI]
GO:0007155        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007399        [VIEW IN EMBL-EBI]
GO:0007417        [VIEW IN EMBL-EBI]
GO:0007420        [VIEW IN EMBL-EBI]
GO:0007565        [VIEW IN EMBL-EBI]
GO:0008104        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008283        [VIEW IN EMBL-EBI]
GO:0009605        [VIEW IN EMBL-EBI]
GO:0009607        [VIEW IN EMBL-EBI]
GO:0009617        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009790        [VIEW IN EMBL-EBI]
GO:0009792        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0015031        [VIEW IN EMBL-EBI]
GO:0015630        [VIEW IN EMBL-EBI]
GO:0015833        [VIEW IN EMBL-EBI]
GO:0015931        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0016973        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022610        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0030686        [VIEW IN EMBL-EBI]
GO:0030688        [VIEW IN EMBL-EBI]
GO:0031503        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032496        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034097        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034613        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0042886        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043009        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043207        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044430        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044703        [VIEW IN EMBL-EBI]
GO:0044706        [VIEW IN EMBL-EBI]
GO:0045177        [VIEW IN EMBL-EBI]
GO:0045184        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0046907        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048513        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050657        [VIEW IN EMBL-EBI]
GO:0050658        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051028        [VIEW IN EMBL-EBI]
GO:0051168        [VIEW IN EMBL-EBI]
GO:0051169        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0051236        [VIEW IN EMBL-EBI]
GO:0051641        [VIEW IN EMBL-EBI]
GO:0051649        [VIEW IN EMBL-EBI]
GO:0051704        [VIEW IN EMBL-EBI]
GO:0051707        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060322        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070555        [VIEW IN EMBL-EBI]
GO:0070727        [VIEW IN EMBL-EBI]
GO:0070848        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0071166        [VIEW IN EMBL-EBI]
GO:0071216        [VIEW IN EMBL-EBI]
GO:0071219        [VIEW IN EMBL-EBI]
GO:0071222        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071345        [VIEW IN EMBL-EBI]
GO:0071347        [VIEW IN EMBL-EBI]
GO:0071363        [VIEW IN EMBL-EBI]
GO:0071396        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071426        [VIEW IN EMBL-EBI]
GO:0071427        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071705        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0090501        [VIEW IN EMBL-EBI]
GO:0090502        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0099080        [VIEW IN EMBL-EBI]
GO:0099081        [VIEW IN EMBL-EBI]
GO:0099512        [VIEW IN EMBL-EBI]
GO:0099513        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1901701        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAGTGAAACAATAAGTATATGTGAAGGAATGATTACATACGACGGCTTGGAAGCTTGTATTATCAACAATCAGTCATATGAAGAAGAAGAAGAAGAAGAAGAGAGTGGAACAAACGGATGCAGCCTGACAGATTCATTGGAAGATGATGCATTCTCAAGCTGTTCATCAAGCAAAGAGGCCTCCAGCTCTTTTTCTTCAAAATGGTTACCGATGAAGCATGAAGAACACTGTTCCAATGGGTTGAACTTATCTGGAAGGTCCAAACAGTTTGATGGTAAGGAGAAACCAAGCTACGTCTACTGCCATTTGGATGTGGAAGCTATGAAGGAGAAATTCTCAAAGCTATTGCTTGGGGAGGATGTCACTGGGGGATGCAAGGGTATCCAAGTAGCTTTGGCTTTGTCTAATGCTGTAACACATCTCGCTAACTCGATATTTGGGGAGCTATGGAAACTGGAACCTCTCTCTGAGGAGAAGAAACAGAAATGGAGAAGAGAAATGGATTGGCTACTTTCTCCAACTAACTACATGATTGAGTTAGTCCCTACTAAGCAAACTGATGCCAATGGAAGATCAATTGAGATAATGACACCGAAAGCTCGTGCAGACATTCATATGAATCTCCCAGCTCTTCAGAAACTGGACTCCATGCTAATTGAGATATTGGACTCAATGGTGAAAACAGAGTTTTGGTATTCAGAAACCGGTAGTAGAGCTGAGGGGACGAACAAGACGACAAGCGAGAGCAAGCGATGGTGGCTTCCATCACCAAAAGTGCCCAAACCTGGTCTCTCTAACTCAGCAAGAAAGAAACTGCTAGACAAGGGCAAAGTTGTTTATCAAGTCTTCAAAGCTACTAAATCCATAAATGAAAACGTTCTTCTCGAAATGCCAGTACCATCCATTATCAAAGAAGCAATACCCAAATCTGGAAAGAACAGCCTCGGTGATGAACTGTACAAAATGTTGGTTGCAGAATCAACCACAGTGGATGAAATCCTTGTATCTCTCAAGCTTGGGACCGAACATACTGCGCTCGAGACTGTTAACAAGTTAGAATCTGCTATATTTGCATGGAAGGAAAGGATTACAGAGCAGGAAATCAACACTAAATCTCCTGTGAGGACACCGTGGTCATTTGCTAAAGATCCATTGTCTGACACTGGTCGGAATGAGTTTCTCTTGAACAGAGCGGAAGCACTTAGAAGTCAGATCAAATCCAAGTACCCTAATCTTCCTCAGTCGTTTCTTGATGCCACAAAAATTCAGTATGGCAAGGACGTAGGTCATGCGGTTCTTGAGGCATATTCAAGAACACTTGCTAATTTGGCGTACAGGATACTTTCAAGAATGGGAGAGATATTGAAAGAAGATTCTTTGAGTAACCCAAACTCTCCTGCGCCACCGAGTTGTTTCCCTAGCTCTCGTGATCTTTACAGAACACCTGAGAGGCCTTTGCTTTCGTCTCGTGCAAGGCATTCTCTAACAGATGACATGAAGAAAGCCGATGGGATACAGGCGGAAACTGGTTTAGATTTCTTGTTCGCAGATGCTAAGGTCAGTTCGGTGAGTGCAGCAACTCCGAGCAGGAGCAGTAGGATATGGTGTATGAGCAAAGTACCGCCTGATGCTTCTCCTTGA
Protein:  
MSETISICEGMITYDGLEACIINNQSYEEEEEEEESGTNGCSLTDSLEDDAFSSCSSSKEASSSFSSKWLPMKHEEHCSNGLNLSGRSKQFDGKEKPSYVYCHLDVEAMKEKFSKLLLGEDVTGGCKGIQVALALSNAVTHLANSIFGELWKLEPLSEEKKQKWRREMDWLLSPTNYMIELVPTKQTDANGRSIEIMTPKARADIHMNLPALQKLDSMLIEILDSMVKTEFWYSETGSRAEGTNKTTSESKRWWLPSPKVPKPGLSNSARKKLLDKGKVVYQVFKATKSINENVLLEMPVPSIIKEAIPKSGKNSLGDELYKMLVAESTTVDEILVSLKLGTEHTALETVNKLESAIFAWKERITEQEINTKSPVRTPWSFAKDPLSDTGRNEFLLNRAEALRSQIKSKYPNLPQSFLDATKIQYGKDVGHAVLEAYSRTLANLAYRILSRMGEILKEDSLSNPNSPAPPSCFPSSRDLYRTPERPLLSSRARHSLTDDMKKADGIQAETGLDFLFADAKVSSVSAATPSRSSRIWCMSKVPPDASP